Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gm18958-201ENSMUST00000174258 762 ntBASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt42Q6IFX2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.61■□□□□ 0.25
Krt42Q6IFX2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Gm7638-201ENSMUST00000121348 967 ntBASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt42Q6IFX2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Krt42Q6IFX2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms