Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Gli3Q61602 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Gm8969-201ENSMUST00000199694 526 ntBASIC21.71■■□□□ 1.07
Gli3Q61602 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC21.71■■□□□ 1.07
Gli3Q61602 CT030684.1-201ENSMUST00000227292 914 ntBASIC21.71■■□□□ 1.07
Gli3Q61602 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Gli3Q61602 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Gli3Q61602 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Gli3Q61602 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC21.7■■□□□ 1.06
Gli3Q61602 Gm14928-201ENSMUST00000120198 477 ntBASIC21.7■■□□□ 1.06
Gli3Q61602 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Gli3Q61602 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Gli3Q61602 AC122024.2-201ENSMUST00000220086 871 ntBASIC21.7■■□□□ 1.06
Gli3Q61602 Gm6888-201ENSMUST00000221983 706 ntBASIC21.7■■□□□ 1.06
Gli3Q61602 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.7■■□□□ 1.06
Gli3Q61602 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.7■■□□□ 1.06
Gli3Q61602 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Gli3Q61602 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gli3Q61602 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.7■■□□□ 1.06
Gli3Q61602 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.69■■□□□ 1.06
Gli3Q61602 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
Gli3Q61602 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Gli3Q61602 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.69■■□□□ 1.06
Gli3Q61602 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Gli3Q61602 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.69■■□□□ 1.06
Gli3Q61602 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Gm12138-201ENSMUST00000122180 951 ntBASIC21.69■■□□□ 1.06
Gli3Q61602 Gm12017-201ENSMUST00000122453 1003 ntBASIC21.69■■□□□ 1.06
Gli3Q61602 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Gm18062-201ENSMUST00000208020 547 ntBASIC21.69■■□□□ 1.06
Gli3Q61602 Gm18055-201ENSMUST00000208254 547 ntBASIC21.69■■□□□ 1.06
Gli3Q61602 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC21.69■■□□□ 1.06
Gli3Q61602 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gli3Q61602 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gli3Q61602 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gli3Q61602 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.68■■□□□ 1.06
Gli3Q61602 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gli3Q61602 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Gli3Q61602 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gli3Q61602 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gli3Q61602 Gm29361-201ENSMUST00000183323 2000 ntBASIC21.67■■□□□ 1.06
Gli3Q61602 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
Gli3Q61602 AC124751.1-201ENSMUST00000222716 1408 ntBASIC21.67■■□□□ 1.06
Gli3Q61602 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC21.67■■□□□ 1.06
Gli3Q61602 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Gli3Q61602 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC21.67■■□□□ 1.06
Gli3Q61602 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.67■■□□□ 1.06
Gli3Q61602 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.67■■□□□ 1.06
Gli3Q61602 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.67■■□□□ 1.06
Gli3Q61602 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gli3Q61602 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gli3Q61602 Gm27680-201ENSMUST00000184192 160 ntBASIC21.66■■□□□ 1.06
Gli3Q61602 Gm29541-201ENSMUST00000191351 678 ntBASIC21.66■■□□□ 1.06
Gli3Q61602 Gm43630-201ENSMUST00000201550 776 ntBASIC21.66■■□□□ 1.06
Gli3Q61602 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gli3Q61602 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gli3Q61602 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gli3Q61602 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gli3Q61602 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gli3Q61602 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Syt7-204ENSMUST00000223586 1344 ntBASIC21.65■■□□□ 1.06
Gli3Q61602 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gli3Q61602 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gli3Q61602 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.65■■□□□ 1.06
Gli3Q61602 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms