Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm11336-201ENSMUST00000118168 334 ntBASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm27437-201ENSMUST00000183429 107 ntBASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm5312-201ENSMUST00000203728 547 ntBASIC18.57■□□□□ 0.56
Foxd1Q61345 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.57■□□□□ 0.56
Foxd1Q61345 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Foxd1Q61345 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.57■□□□□ 0.56
Foxd1Q61345 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxd1Q61345 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.56■□□□□ 0.56
Foxd1Q61345 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Foxd1Q61345 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxd1Q61345 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.56■□□□□ 0.56
Foxd1Q61345 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.55■□□□□ 0.56
Foxd1Q61345 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.55■□□□□ 0.56
Foxd1Q61345 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxd1Q61345 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxd1Q61345 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Foxd1Q61345 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Gm7222-201ENSMUST00000117512 906 ntBASIC18.54■□□□□ 0.56
Foxd1Q61345 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.54■□□□□ 0.56
Foxd1Q61345 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.54■□□□□ 0.56
Foxd1Q61345 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.54■□□□□ 0.56
Foxd1Q61345 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Foxd1Q61345 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Foxd1Q61345 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.53■□□□□ 0.56
Foxd1Q61345 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.53■□□□□ 0.56
Foxd1Q61345 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.53■□□□□ 0.56
Foxd1Q61345 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Foxd1Q61345 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms