Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.49■□□□□ 0.55
Scnn1aQ61180 Gm15590-201ENSMUST00000078419 552 ntBASIC18.49■□□□□ 0.55
Scnn1aQ61180 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Gm13036-201ENSMUST00000117799 748 ntBASIC18.48■□□□□ 0.55
Scnn1aQ61180 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Gm5364-201ENSMUST00000216789 889 ntBASIC18.48■□□□□ 0.55
Scnn1aQ61180 Psmb5-202ENSMUST00000227257 622 ntBASIC18.48■□□□□ 0.55
Scnn1aQ61180 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scnn1aQ61180 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scnn1aQ61180 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Gm8344-201ENSMUST00000119813 856 ntBASIC18.47■□□□□ 0.55
Scnn1aQ61180 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scnn1aQ61180 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.46■□□□□ 0.55
Scnn1aQ61180 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scnn1aQ61180 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scnn1aQ61180 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scnn1aQ61180 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
Scnn1aQ61180 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.45■□□□□ 0.54
Scnn1aQ61180 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms