Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch1Q61115 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch1Q61115 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Ptch1Q61115 Gm5866-201ENSMUST00000177881 973 ntBASIC23.15■■□□□ 1.3
Ptch1Q61115 AC127302.2-201ENSMUST00000215212 268 ntBASIC23.15■■□□□ 1.3
Ptch1Q61115 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch1Q61115 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptch1Q61115 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptch1Q61115 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC23.14■■□□□ 1.29
Ptch1Q61115 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch1Q61115 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Ptch1Q61115 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch1Q61115 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch1Q61115 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.14■■□□□ 1.29
Ptch1Q61115 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch1Q61115 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptch1Q61115 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 AC126250.1-201ENSMUST00000228343 1768 ntBASIC23.13■■□□□ 1.29
Ptch1Q61115 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC23.13■■□□□ 1.29
Ptch1Q61115 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ptch1Q61115 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptch1Q61115 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC23.13■■□□□ 1.29
Ptch1Q61115 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ptch1Q61115 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Gm16198-201ENSMUST00000118766 670 ntBASIC23.12■■□□□ 1.29
Ptch1Q61115 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ptch1Q61115 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptch1Q61115 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
Ptch1Q61115 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ptch1Q61115 Gm37277-201ENSMUST00000194052 1111 ntBASIC23.11■■□□□ 1.29
Ptch1Q61115 Gm19164-201ENSMUST00000210667 640 ntBASIC23.11■■□□□ 1.29
Ptch1Q61115 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Gm2423-201ENSMUST00000074863 733 ntBASIC23.11■■□□□ 1.29
Ptch1Q61115 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ptch1Q61115 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC23.1■■□□□ 1.29
Ptch1Q61115 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Gm6018-201ENSMUST00000216090 1306 ntBASIC23.1■■□□□ 1.29
Ptch1Q61115 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ptch1Q61115 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ptch1Q61115 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptch1Q61115 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms