Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm27300-201ENSMUST00000184085 97 ntBASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm27335-201ENSMUST00000184758 97 ntBASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm9682-201ENSMUST00000197505 556 ntBASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm45167-201ENSMUST00000208007 322 ntBASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf1Q5U4C3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm4899-201ENSMUST00000178708 719 ntBASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.97■□□□□ 0.95
Scaf1Q5U4C3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Gm4995-201ENSMUST00000117247 432 ntBASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf1Q5U4C3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scaf1Q5U4C3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scaf1Q5U4C3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms