Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-4Q5R1H9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Gm15375-201ENSMUST00000119510 849 ntBASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav7d-4Q5R1H9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7d-4Q5R1H9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Gm27000-201ENSMUST00000182943 842 ntBASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms