Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Timm23-208ENSMUST00000226683 750 ntBASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Gm4974-201ENSMUST00000209974 875 ntBASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8d-1Q5R1H8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav8d-1Q5R1H8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms