Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-3Q5R1E6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-3Q5R1E6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-3Q5R1E6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-3Q5R1E6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Prob1-201ENSMUST00000097619 3021 ntBASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.96□□□□□ -0.33
Trav6-3Q5R1E6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-3Q5R1E6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Gm13559-201ENSMUST00000120476 863 ntBASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-3Q5R1E6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Mir5130-201ENSMUST00000175160 84 ntBASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms