Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Actl10-202ENSMUST00000226583 1501 ntBASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm7638-201ENSMUST00000121348 967 ntBASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms