Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Gm6754-201ENSMUST00000117124 913 ntBASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Gm25406-201ENSMUST00000157599 105 ntBASIC17.64■□□□□ 0.41
Scarf1Q5ND28 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Birc2-201ENSMUST00000054878 378 ntBASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
Scarf1Q5ND28 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Gm24589-201ENSMUST00000116692 94 ntBASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scarf1Q5ND28 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Gm15626-201ENSMUST00000117478 868 ntBASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Gm12644-201ENSMUST00000119935 606 ntBASIC17.62■□□□□ 0.41
Scarf1Q5ND28 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Gm25745-201ENSMUST00000174945 133 ntBASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scarf1Q5ND28 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scarf1Q5ND28 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.6■□□□□ 0.41
Scarf1Q5ND28 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms