Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf43Q5NCP0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf43Q5NCP0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Gm27397-201ENSMUST00000184997 107 ntBASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Gm36967-201ENSMUST00000193814 266 ntBASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf43Q5NCP0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf43Q5NCP0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf43Q5NCP0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf43Q5NCP0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms