Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
Shank3Q4ACU6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shank3Q4ACU6 Gm27301-201ENSMUST00000184012 127 ntBASIC19.96■□□□□ 0.79
Shank3Q4ACU6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shank3Q4ACU6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shank3Q4ACU6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shank3Q4ACU6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.96■□□□□ 0.79
Shank3Q4ACU6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Gm12428-201ENSMUST00000119844 727 ntBASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Gm23547-201ENSMUST00000158210 271 ntBASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank3Q4ACU6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank3Q4ACU6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Gm18889-201ENSMUST00000174284 929 ntBASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shank3Q4ACU6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Rprl2-201ENSMUST00000157150 290 ntBASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank3Q4ACU6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm22065-201ENSMUST00000103753 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm22066-201ENSMUST00000103761 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm24932-201ENSMUST00000103763 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm24115-201ENSMUST00000103799 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm22190-201ENSMUST00000103827 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm22191-201ENSMUST00000103831 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm24721-201ENSMUST00000103849 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm28018-201ENSMUST00000103869 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm26399-201ENSMUST00000103937 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm25349-201ENSMUST00000177728 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm23616-201ENSMUST00000177797 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm25871-201ENSMUST00000177816 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm24752-201ENSMUST00000178240 110 ntBASIC19.91■□□□□ 0.78
Shank3Q4ACU6 Gm24496-201ENSMUST00000178287 110 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms