Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trim80Q3V061 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim80Q3V061 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim80Q3V061 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim80Q3V061 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.7■□□□□ 0.26
Trim80Q3V061 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim80Q3V061 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim80Q3V061 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.69■□□□□ 0.26
Trim80Q3V061 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim80Q3V061 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim80Q3V061 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.68■□□□□ 0.26
Trim80Q3V061 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Gm7367-201ENSMUST00000057611 492 ntBASIC16.68■□□□□ 0.26
Trim80Q3V061 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.68■□□□□ 0.26
Trim80Q3V061 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim80Q3V061 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Trim80Q3V061 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.67■□□□□ 0.26
Trim80Q3V061 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.67■□□□□ 0.26
Trim80Q3V061 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim80Q3V061 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim80Q3V061 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim80Q3V061 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.66■□□□□ 0.26
Trim80Q3V061 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Gm18959-201ENSMUST00000208954 655 ntBASIC16.66■□□□□ 0.26
Trim80Q3V061 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms