Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Mir6404-201ENSMUST00000183699 94 ntBASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Gm17971-201ENSMUST00000190239 806 ntBASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Nlrc4Q3UP24 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nlrc4Q3UP24 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.96■□□□□ 0.3
Nlrc4Q3UP24 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Gm15165-201ENSMUST00000118140 502 ntBASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nlrc4Q3UP24 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.94■□□□□ 0.3
Nlrc4Q3UP24 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm34391-201ENSMUST00000203706 907 ntBASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nlrc4Q3UP24 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nlrc4Q3UP24 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms