Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rufy4Q3TYX8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rufy4Q3TYX8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rufy4Q3TYX8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Gm25406-201ENSMUST00000157599 105 ntBASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rufy4Q3TYX8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rufy4Q3TYX8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rufy4Q3TYX8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Rufy4Q3TYX8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
Rufy4Q3TYX8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Mir6404-201ENSMUST00000183699 94 ntBASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rufy4Q3TYX8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Gm6376-201ENSMUST00000209407 580 ntBASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Rps4l-201ENSMUST00000071745 943 ntBASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rufy4Q3TYX8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Gm4459-201ENSMUST00000118750 468 ntBASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rufy4Q3TYX8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Gm7862-201ENSMUST00000121461 292 ntBASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.67■□□□□ 0.42
Rufy4Q3TYX8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms