Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.47□□□□□ -0.41
Cdx4Q07424 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.47□□□□□ -0.41
Cdx4Q07424 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdx4Q07424 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx4Q07424 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdx4Q07424 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.46□□□□□ -0.41
Cdx4Q07424 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cdx4Q07424 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx4Q07424 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx4Q07424 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cdx4Q07424 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm9103-201ENSMUST00000119371 405 ntBASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm27704-201ENSMUST00000185094 107 ntBASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm29518-201ENSMUST00000190858 372 ntBASIC12.45□□□□□ -0.42
Cdx4Q07424 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm17808-201ENSMUST00000200859 894 ntBASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx4Q07424 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx4Q07424 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms