Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm27742-201ENSMUST00000184667 60 ntBASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm27704-201ENSMUST00000185094 107 ntBASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.16□□□□□ -0.14
Thbs3Q05895 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Gm7284-201ENSMUST00000131667 944 ntBASIC14.15□□□□□ -0.14
Thbs3Q05895 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs3Q05895 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs3Q05895 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Thbs3Q05895 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Gm14859-201ENSMUST00000117752 357 ntBASIC14.14□□□□□ -0.15
Thbs3Q05895 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.14□□□□□ -0.15
Thbs3Q05895 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.14□□□□□ -0.15
Thbs3Q05895 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Thbs3Q05895 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.14□□□□□ -0.15
Thbs3Q05895 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs3Q05895 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Thbs3Q05895 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.13□□□□□ -0.15
Thbs3Q05895 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Gm13312-201ENSMUST00000119631 718 ntBASIC14.13□□□□□ -0.15
Thbs3Q05895 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.13□□□□□ -0.15
Thbs3Q05895 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Thbs3Q05895 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Thbs3Q05895 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs3Q05895 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms