Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hspg2Q05793 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.82□□□□□ -0.52
Hspg2Q05793 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hspg2Q05793 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hspg2Q05793 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.82□□□□□ -0.52
Hspg2Q05793 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hspg2Q05793 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hspg2Q05793 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hspg2Q05793 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.81□□□□□ -0.52
Hspg2Q05793 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hspg2Q05793 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.81□□□□□ -0.52
Hspg2Q05793 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.81□□□□□ -0.52
Hspg2Q05793 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.81□□□□□ -0.52
Hspg2Q05793 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.81□□□□□ -0.52
Hspg2Q05793 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.81□□□□□ -0.52
Hspg2Q05793 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm45747-201ENSMUST00000212203 999 ntBASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.81□□□□□ -0.52
Hspg2Q05793 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.81□□□□□ -0.52
Hspg2Q05793 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hspg2Q05793 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gm18622-201ENSMUST00000219361 595 ntBASIC11.81□□□□□ -0.52
Hspg2Q05793 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hspg2Q05793 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hspg2Q05793 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.8□□□□□ -0.52
Hspg2Q05793 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.8□□□□□ -0.52
Hspg2Q05793 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Hspg2Q05793 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.8□□□□□ -0.52
Hspg2Q05793 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Hspg2Q05793 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hspg2Q05793 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hspg2Q05793 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.79□□□□□ -0.52
Hspg2Q05793 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.79□□□□□ -0.52
Hspg2Q05793 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Gm13365-201ENSMUST00000121188 973 ntBASIC11.79□□□□□ -0.52
Hspg2Q05793 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms