Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim43cP86449 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim43cP86449 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim43cP86449 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.54■□□□□ 0.4
Trim43cP86449 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.54■□□□□ 0.4
Trim43cP86449 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim43cP86449 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim43cP86449 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim43cP86449 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim43cP86449 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim43cP86449 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim43cP86449 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43cP86449 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim43cP86449 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43cP86449 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim43cP86449 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43cP86449 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim43cP86449 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Trim43cP86449 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.52■□□□□ 0.4
Trim43cP86449 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim43cP86449 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim43cP86449 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43cP86449 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.52■□□□□ 0.4
Trim43cP86449 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim43cP86449 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim43cP86449 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim43cP86449 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43cP86449 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim43cP86449 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43cP86449 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43cP86449 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Trim43cP86449 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim43cP86449 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.51■□□□□ 0.39
Trim43cP86449 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim43cP86449 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim43cP86449 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim43cP86449 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Mir3081-201ENSMUST00000175305 84 ntBASIC17.51■□□□□ 0.39
Trim43cP86449 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trim43cP86449 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.51■□□□□ 0.39
Trim43cP86449 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.51■□□□□ 0.39
Trim43cP86449 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms