Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
H3f3aP84244 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.35□□□□□ -0.11
H3f3aP84244 Mir3081-201ENSMUST00000175305 84 ntBASIC14.35□□□□□ -0.11
H3f3aP84244 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.35□□□□□ -0.11
H3f3aP84244 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H3f3aP84244 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3f3aP84244 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
H3f3aP84244 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.34□□□□□ -0.11
H3f3aP84244 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.34□□□□□ -0.11
H3f3aP84244 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.34□□□□□ -0.11
H3f3aP84244 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H3f3aP84244 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.34□□□□□ -0.11
H3f3aP84244 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Gm7367-201ENSMUST00000057611 492 ntBASIC14.34□□□□□ -0.11
H3f3aP84244 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3aP84244 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H3f3aP84244 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H3f3aP84244 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3f3aP84244 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
H3f3aP84244 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Ank2-226ENSMUST00000189368 339 ntBASIC14.33□□□□□ -0.12
H3f3aP84244 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.33□□□□□ -0.12
H3f3aP84244 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.33□□□□□ -0.12
H3f3aP84244 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3f3aP84244 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3aP84244 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
H3f3aP84244 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.32□□□□□ -0.12
H3f3aP84244 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Rprl3-201ENSMUST00000157400 290 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms