Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cux2P70298 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Cux2P70298 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
Cux2P70298 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cux2P70298 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cux2P70298 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC26.29■■□□□ 1.8
Cux2P70298 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Cux2P70298 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cux2P70298 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
Cux2P70298 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cux2P70298 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Cux2P70298 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cux2P70298 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC26.28■■□□□ 1.8
Cux2P70298 Gm27618-201ENSMUST00000183671 60 ntBASIC26.28■■□□□ 1.8
Cux2P70298 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC26.28■■□□□ 1.8
Cux2P70298 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cux2P70298 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC26.28■■□□□ 1.8
Cux2P70298 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC26.28■■□□□ 1.8
Cux2P70298 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Cux2P70298 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC26.28■■□□□ 1.8
Cux2P70298 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cux2P70298 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cux2P70298 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Cux2P70298 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Cux2P70298 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cux2P70298 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC26.27■■□□□ 1.8
Cux2P70298 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cux2P70298 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC26.27■■□□□ 1.8
Cux2P70298 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cux2P70298 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cux2P70298 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cux2P70298 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Cux2P70298 Gm29361-201ENSMUST00000183323 2000 ntBASIC26.26■■□□□ 1.79
Cux2P70298 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cux2P70298 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Cux2P70298 Gm37519-201ENSMUST00000191687 2210 ntBASIC26.26■■□□□ 1.79
Cux2P70298 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cux2P70298 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Cux2P70298 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC26.26■■□□□ 1.79
Cux2P70298 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cux2P70298 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cux2P70298 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cux2P70298 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC26.25■■□□□ 1.79
Cux2P70298 Gm12008-201ENSMUST00000117791 755 ntBASIC26.25■■□□□ 1.79
Cux2P70298 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC26.25■■□□□ 1.79
Cux2P70298 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cux2P70298 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC26.25■■□□□ 1.79
Cux2P70298 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC26.25■■□□□ 1.79
Cux2P70298 CT025555.1-201ENSMUST00000225901 1217 ntBASIC26.25■■□□□ 1.79
Cux2P70298 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Cux2P70298 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cux2P70298 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cux2P70298 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Cux2P70298 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
Cux2P70298 Gm38294-201ENSMUST00000192831 381 ntBASIC26.24■■□□□ 1.79
Cux2P70298 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Cux2P70298 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cux2P70298 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Gm13410-201ENSMUST00000117058 1415 ntBASIC26.23■■□□□ 1.79
Cux2P70298 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
Cux2P70298 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC26.23■■□□□ 1.79
Cux2P70298 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cux2P70298 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC26.22■■□□□ 1.79
Cux2P70298 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Gm14127-201ENSMUST00000117906 678 ntBASIC26.22■■□□□ 1.79
Cux2P70298 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC26.22■■□□□ 1.79
Cux2P70298 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cux2P70298 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC26.22■■□□□ 1.79
Cux2P70298 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC26.22■■□□□ 1.79
Cux2P70298 Gm11453-201ENSMUST00000117318 1007 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms