Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PrkcbP68404 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PrkcbP68404 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PrkcbP68404 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PrkcbP68404 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.41■□□□□ 0.38
PrkcbP68404 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PrkcbP68404 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PrkcbP68404 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PrkcbP68404 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44357-201ENSMUST00000195897 142 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm19658-201ENSMUST00000196231 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44367-201ENSMUST00000196836 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44350-201ENSMUST00000197197 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44390-201ENSMUST00000197533 144 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44313-201ENSMUST00000198018 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44486-201ENSMUST00000198508 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44314-201ENSMUST00000199263 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44394-201ENSMUST00000199558 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44484-201ENSMUST00000199873 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44466-201ENSMUST00000200264 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Gm44359-201ENSMUST00000200671 138 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.4■□□□□ 0.38
PrkcbP68404 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PrkcbP68404 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkcbP68404 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PrkcbP68404 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PrkcbP68404 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.39■□□□□ 0.37
PrkcbP68404 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkcbP68404 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PrkcbP68404 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.39■□□□□ 0.37
PrkcbP68404 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
PrkcbP68404 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PrkcbP68404 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PrkcbP68404 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.38■□□□□ 0.37
PrkcbP68404 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.38■□□□□ 0.37
PrkcbP68404 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PrkcbP68404 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Gm9172-201ENSMUST00000212092 954 ntBASIC17.38■□□□□ 0.37
PrkcbP68404 Mzt1-203ENSMUST00000227948 952 ntBASIC17.38■□□□□ 0.37
PrkcbP68404 Rps4l-201ENSMUST00000071745 943 ntBASIC17.38■□□□□ 0.37
PrkcbP68404 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.38■□□□□ 0.37
PrkcbP68404 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkcbP68404 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PrkcbP68404 Gm4459-201ENSMUST00000118750 468 ntBASIC17.37■□□□□ 0.37
PrkcbP68404 Gm12497-201ENSMUST00000138778 237 ntBASIC17.37■□□□□ 0.37
PrkcbP68404 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.37■□□□□ 0.37
PrkcbP68404 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PrkcbP68404 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
PrkcbP68404 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PrkcbP68404 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkcbP68404 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.36■□□□□ 0.37
PrkcbP68404 Haglr-201ENSMUST00000100000 2085 ntBASIC17.36■□□□□ 0.37
PrkcbP68404 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms