Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm25406-201ENSMUST00000157599 105 ntBASIC16.49■□□□□ 0.23
Ybx1P62960 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.49■□□□□ 0.23
Ybx1P62960 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ybx1P62960 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ybx1P62960 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ybx1P62960 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ybx1P62960 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.48■□□□□ 0.23
Ybx1P62960 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.48■□□□□ 0.23
Ybx1P62960 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.48■□□□□ 0.23
Ybx1P62960 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ybx1P62960 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.47■□□□□ 0.23
Ybx1P62960 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.47■□□□□ 0.23
Ybx1P62960 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ybx1P62960 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Gm9172-201ENSMUST00000212092 954 ntBASIC16.47■□□□□ 0.23
Ybx1P62960 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.47■□□□□ 0.23
Ybx1P62960 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ybx1P62960 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Ybx1P62960 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ybx1P62960 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ybx1P62960 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Gm9727-201ENSMUST00000161387 555 ntBASIC16.46■□□□□ 0.23
Ybx1P62960 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ybx1P62960 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.46■□□□□ 0.23
Ybx1P62960 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.46■□□□□ 0.23
Ybx1P62960 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.46■□□□□ 0.23
Ybx1P62960 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ybx1P62960 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Ybx1P62960 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ybx1P62960 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Gm23935-201ENSMUST00000102303 57 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Gm24270-201ENSMUST00000102326 57 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Gm24245-201ENSMUST00000157318 57 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.45■□□□□ 0.22
Ybx1P62960 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms