Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Lsm3P62311 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lsm3P62311 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lsm3P62311 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lsm3P62311 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.79□□□□□ -0.04
Lsm3P62311 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.79□□□□□ -0.04
Lsm3P62311 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.79□□□□□ -0.04
Lsm3P62311 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm3P62311 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm3P62311 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm3P62311 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Lsm3P62311 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Lsm3P62311 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm3P62311 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.78□□□□□ -0.04
Lsm3P62311 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Gm11927-201ENSMUST00000118472 759 ntBASIC14.78□□□□□ -0.04
Lsm3P62311 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Lsm3P62311 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Lsm3P62311 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.78□□□□□ -0.04
Lsm3P62311 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.78□□□□□ -0.04
Lsm3P62311 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Lsm3P62311 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm3P62311 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm3P62311 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Lsm3P62311 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm3P62311 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Lsm3P62311 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.77□□□□□ -0.05
Lsm3P62311 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.77□□□□□ -0.05
Lsm3P62311 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lsm3P62311 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm3P62311 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.76□□□□□ -0.05
Lsm3P62311 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms