Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm27742-201ENSMUST00000184667 60 ntBASIC17.36■□□□□ 0.37
Nub1P54729 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.36■□□□□ 0.37
Nub1P54729 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.36■□□□□ 0.37
Nub1P54729 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nub1P54729 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nub1P54729 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.36■□□□□ 0.37
Nub1P54729 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nub1P54729 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.35■□□□□ 0.37
Nub1P54729 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Nub1P54729 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.35■□□□□ 0.37
Nub1P54729 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.35■□□□□ 0.37
Nub1P54729 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.35■□□□□ 0.37
Nub1P54729 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nub1P54729 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nub1P54729 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Nub1P54729 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nub1P54729 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.34■□□□□ 0.37
Nub1P54729 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nub1P54729 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nub1P54729 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.33■□□□□ 0.37
Nub1P54729 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nub1P54729 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.33■□□□□ 0.36
Nub1P54729 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
Nub1P54729 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nub1P54729 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.33■□□□□ 0.36
Nub1P54729 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nub1P54729 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nub1P54729 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nub1P54729 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.32■□□□□ 0.36
Nub1P54729 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nub1P54729 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nub1P54729 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms