Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Msh6P54276 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Msh6P54276 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.34■□□□□ 0.85
Msh6P54276 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.34■□□□□ 0.85
Msh6P54276 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.34■□□□□ 0.85
Msh6P54276 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm5682-201ENSMUST00000173402 505 ntBASIC20.34■□□□□ 0.85
Msh6P54276 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Msh6P54276 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.34■□□□□ 0.85
Msh6P54276 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Msh6P54276 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Msh6P54276 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.34■□□□□ 0.85
Msh6P54276 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.34■□□□□ 0.85
Msh6P54276 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.34■□□□□ 0.85
Msh6P54276 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.34■□□□□ 0.85
Msh6P54276 Gm27646-201ENSMUST00000183989 110 ntBASIC20.34■□□□□ 0.85
Msh6P54276 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Msh6P54276 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh6P54276 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh6P54276 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh6P54276 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.33■□□□□ 0.84
Msh6P54276 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.33■□□□□ 0.84
Msh6P54276 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Msh6P54276 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh6P54276 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh6P54276 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Msh6P54276 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Msh6P54276 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.32■□□□□ 0.84
Msh6P54276 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.32■□□□□ 0.84
Msh6P54276 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.32■□□□□ 0.84
Msh6P54276 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.32■□□□□ 0.84
Msh6P54276 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh6P54276 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Msh6P54276 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.31■□□□□ 0.84
Msh6P54276 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.31■□□□□ 0.84
Msh6P54276 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh6P54276 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.3■□□□□ 0.84
Msh6P54276 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.3■□□□□ 0.84
Msh6P54276 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.3■□□□□ 0.84
Msh6P54276 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.3■□□□□ 0.84
Msh6P54276 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Msh6P54276 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.3■□□□□ 0.84
Msh6P54276 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.3■□□□□ 0.84
Msh6P54276 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh6P54276 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.3■□□□□ 0.84
Msh6P54276 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
Msh6P54276 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms