Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RoraP51448 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RoraP51448 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RoraP51448 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RoraP51448 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RoraP51448 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RoraP51448 Gm13216-201ENSMUST00000117145 591 ntBASIC15.21■□□□□ 0.03
RoraP51448 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RoraP51448 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.21■□□□□ 0.03
RoraP51448 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.21■□□□□ 0.03
RoraP51448 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.21■□□□□ 0.03
RoraP51448 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RoraP51448 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RoraP51448 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.21■□□□□ 0.02
RoraP51448 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RoraP51448 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RoraP51448 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RoraP51448 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.2■□□□□ 0.02
RoraP51448 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.2■□□□□ 0.02
RoraP51448 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.2■□□□□ 0.02
RoraP51448 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.2■□□□□ 0.02
RoraP51448 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RoraP51448 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RoraP51448 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.19■□□□□ 0.02
RoraP51448 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RoraP51448 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.19■□□□□ 0.02
RoraP51448 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RoraP51448 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RoraP51448 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RoraP51448 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RoraP51448 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RoraP51448 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RoraP51448 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.18■□□□□ 0.02
RoraP51448 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RoraP51448 Gm44357-201ENSMUST00000195897 142 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm19658-201ENSMUST00000196231 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44367-201ENSMUST00000196836 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44350-201ENSMUST00000197197 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44390-201ENSMUST00000197533 144 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44313-201ENSMUST00000198018 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44486-201ENSMUST00000198508 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44314-201ENSMUST00000199263 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44394-201ENSMUST00000199558 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44484-201ENSMUST00000199873 138 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms