Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shmt1P50431 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Shmt1P50431 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Shmt1P50431 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shmt1P50431 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.02■□□□□ 0.32
Shmt1P50431 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Shmt1P50431 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.02■□□□□ 0.32
Shmt1P50431 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.02■□□□□ 0.32
Shmt1P50431 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.02■□□□□ 0.32
Shmt1P50431 Gm7506-201ENSMUST00000207758 815 ntBASIC17.02■□□□□ 0.32
Shmt1P50431 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.02■□□□□ 0.32
Shmt1P50431 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shmt1P50431 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.02■□□□□ 0.32
Shmt1P50431 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shmt1P50431 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt1P50431 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shmt1P50431 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shmt1P50431 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Shmt1P50431 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Mir6404-201ENSMUST00000183699 94 ntBASIC17.01■□□□□ 0.31
Shmt1P50431 Gm28659-201ENSMUST00000188013 759 ntBASIC17.01■□□□□ 0.31
Shmt1P50431 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Gm5864-201ENSMUST00000202263 970 ntBASIC17.01■□□□□ 0.31
Shmt1P50431 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.01■□□□□ 0.31
Shmt1P50431 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shmt1P50431 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17■□□□□ 0.31
Shmt1P50431 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shmt1P50431 AC164629.2-201ENSMUST00000217916 270 ntBASIC17■□□□□ 0.31
Shmt1P50431 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shmt1P50431 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shmt1P50431 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17■□□□□ 0.31
Shmt1P50431 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17■□□□□ 0.31
Shmt1P50431 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shmt1P50431 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shmt1P50431 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.99■□□□□ 0.31
Shmt1P50431 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shmt1P50431 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.99■□□□□ 0.31
Shmt1P50431 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.99■□□□□ 0.31
Shmt1P50431 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shmt1P50431 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shmt1P50431 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.99■□□□□ 0.31
Shmt1P50431 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.99■□□□□ 0.31
Shmt1P50431 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shmt1P50431 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt1P50431 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt1P50431 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.98■□□□□ 0.31
Shmt1P50431 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt1P50431 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt1P50431 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shmt1P50431 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms