Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SftpbP50405 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SftpbP50405 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SftpbP50405 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
SftpbP50405 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.53■□□□□ 0.24
SftpbP50405 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.53■□□□□ 0.24
SftpbP50405 Gm2274-201ENSMUST00000184539 609 ntBASIC16.53■□□□□ 0.24
SftpbP50405 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SftpbP50405 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Gm10566-201ENSMUST00000086739 996 ntBASIC16.53■□□□□ 0.24
SftpbP50405 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SftpbP50405 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SftpbP50405 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.53■□□□□ 0.24
SftpbP50405 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
SftpbP50405 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.52■□□□□ 0.24
SftpbP50405 Gm18421-201ENSMUST00000204122 625 ntBASIC16.52■□□□□ 0.24
SftpbP50405 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
SftpbP50405 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.52■□□□□ 0.24
SftpbP50405 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SftpbP50405 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SftpbP50405 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SftpbP50405 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.51■□□□□ 0.23
SftpbP50405 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.51■□□□□ 0.23
SftpbP50405 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SftpbP50405 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SftpbP50405 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.51■□□□□ 0.23
SftpbP50405 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.51■□□□□ 0.23
SftpbP50405 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SftpbP50405 Gm7213-201ENSMUST00000215977 950 ntBASIC16.51■□□□□ 0.23
SftpbP50405 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SftpbP50405 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.5■□□□□ 0.23
SftpbP50405 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Gm16061-201ENSMUST00000122167 857 ntBASIC16.5■□□□□ 0.23
SftpbP50405 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms