Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.19■□□□□ 0.5
Atoh1P48985 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atoh1P48985 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.19■□□□□ 0.5
Atoh1P48985 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atoh1P48985 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.18■□□□□ 0.5
Atoh1P48985 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Gm9682-201ENSMUST00000197505 556 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.18■□□□□ 0.5
Atoh1P48985 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Atoh1P48985 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atoh1P48985 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Atoh1P48985 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.17■□□□□ 0.5
Atoh1P48985 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.17■□□□□ 0.5
Atoh1P48985 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.17■□□□□ 0.5
Atoh1P48985 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.17■□□□□ 0.5
Atoh1P48985 Gm5312-201ENSMUST00000203728 547 ntBASIC18.17■□□□□ 0.5
Atoh1P48985 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Atoh1P48985 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atoh1P48985 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Atoh1P48985 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.17■□□□□ 0.5
Atoh1P48985 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.17■□□□□ 0.5
Atoh1P48985 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atoh1P48985 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Atoh1P48985 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.16■□□□□ 0.5
Atoh1P48985 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atoh1P48985 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Gm44335-201ENSMUST00000196879 141 ntBASIC18.15■□□□□ 0.5
Atoh1P48985 Gm44297-201ENSMUST00000198304 141 ntBASIC18.15■□□□□ 0.5
Atoh1P48985 Gm44346-201ENSMUST00000198851 141 ntBASIC18.15■□□□□ 0.5
Atoh1P48985 Gm20949-201ENSMUST00000206478 952 ntBASIC18.15■□□□□ 0.5
Atoh1P48985 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atoh1P48985 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
Atoh1P48985 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atoh1P48985 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Atoh1P48985 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms