Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Gm715-201ENSMUST00000117865 831 ntBASIC13.67□□□□□ -0.22
Hist1h1dP43277 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.67□□□□□ -0.22
Hist1h1dP43277 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.67□□□□□ -0.22
Hist1h1dP43277 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Asic1-205ENSMUST00000228185 1818 ntBASIC13.67□□□□□ -0.22
Hist1h1dP43277 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h1dP43277 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Gm10653-202ENSMUST00000139570 835 ntBASIC13.66□□□□□ -0.22
Hist1h1dP43277 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Gm18421-201ENSMUST00000204122 625 ntBASIC13.66□□□□□ -0.22
Hist1h1dP43277 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.66□□□□□ -0.22
Hist1h1dP43277 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.66□□□□□ -0.22
Hist1h1dP43277 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h1dP43277 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.65□□□□□ -0.22
Hist1h1dP43277 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.65□□□□□ -0.22
Hist1h1dP43277 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Gm13168-201ENSMUST00000121771 632 ntBASIC13.65□□□□□ -0.22
Hist1h1dP43277 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1dP43277 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.64□□□□□ -0.23
Hist1h1dP43277 Gm21814-202ENSMUST00000203277 873 ntBASIC13.64□□□□□ -0.23
Hist1h1dP43277 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.64□□□□□ -0.23
Hist1h1dP43277 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms