Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm16061-201ENSMUST00000122167 857 ntBASIC15.18■□□□□ 0.02
Sox6P40645 Gm13474-201ENSMUST00000122466 815 ntBASIC15.18■□□□□ 0.02
Sox6P40645 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.18■□□□□ 0.02
Sox6P40645 Gm7889-201ENSMUST00000185591 958 ntBASIC15.18■□□□□ 0.02
Sox6P40645 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox6P40645 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox6P40645 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.18■□□□□ 0.02
Sox6P40645 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.18■□□□□ 0.02
Sox6P40645 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox6P40645 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox6P40645 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox6P40645 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Sox6P40645 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox6P40645 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Sox6P40645 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox6P40645 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox6P40645 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Mir7071-201ENSMUST00000184847 69 ntBASIC15.17■□□□□ 0.02
Sox6P40645 Gm18959-201ENSMUST00000208954 655 ntBASIC15.17■□□□□ 0.02
Sox6P40645 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Sox6P40645 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox6P40645 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox6P40645 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox6P40645 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.16■□□□□ 0.02
Sox6P40645 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.16■□□□□ 0.02
Sox6P40645 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.16■□□□□ 0.02
Sox6P40645 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Sox6P40645 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox6P40645 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox6P40645 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sox6P40645 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Sox6P40645 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.15■□□□□ 0.02
Sox6P40645 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox6P40645 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.15■□□□□ 0.02
Sox6P40645 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox6P40645 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox6P40645 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Sox6P40645 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.14■□□□□ 0.02
Sox6P40645 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox6P40645 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms