Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.33■□□□□ 0.04
Slc6a11P31650 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Gm13474-201ENSMUST00000122466 815 ntBASIC15.32■□□□□ 0.04
Slc6a11P31650 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc6a11P31650 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.32■□□□□ 0.04
Slc6a11P31650 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Slc6a11P31650 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a11P31650 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a11P31650 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.31■□□□□ 0.04
Slc6a11P31650 Gm27389-201ENSMUST00000183622 195 ntBASIC15.31■□□□□ 0.04
Slc6a11P31650 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.31■□□□□ 0.04
Slc6a11P31650 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.31■□□□□ 0.04
Slc6a11P31650 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a11P31650 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Prob1-201ENSMUST00000097619 3021 ntBASIC15.31■□□□□ 0.04
Slc6a11P31650 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Slc6a11P31650 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a11P31650 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Gm27704-201ENSMUST00000185094 107 ntBASIC15.3■□□□□ 0.04
Slc6a11P31650 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Actl10-202ENSMUST00000226583 1501 ntBASIC15.3■□□□□ 0.04
Slc6a11P31650 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a11P31650 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a11P31650 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a11P31650 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.29■□□□□ 0.04
Slc6a11P31650 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.29■□□□□ 0.04
Slc6a11P31650 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms