Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.27□□□□□ -0.12
Cd28P31041 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd28P31041 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.27□□□□□ -0.13
Cd28P31041 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cd28P31041 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd28P31041 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.26□□□□□ -0.13
Cd28P31041 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cd28P31041 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.26□□□□□ -0.13
Cd28P31041 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cd28P31041 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.26□□□□□ -0.13
Cd28P31041 Gm8495-201ENSMUST00000188740 694 ntBASIC14.26□□□□□ -0.13
Cd28P31041 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cd28P31041 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cd28P31041 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
Cd28P31041 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd28P31041 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cd28P31041 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.25□□□□□ -0.13
Cd28P31041 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Gm7638-201ENSMUST00000121348 967 ntBASIC14.25□□□□□ -0.13
Cd28P31041 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.25□□□□□ -0.13
Cd28P31041 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.25□□□□□ -0.13
Cd28P31041 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.25□□□□□ -0.13
Cd28P31041 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd28P31041 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd28P31041 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.24□□□□□ -0.13
Cd28P31041 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cd28P31041 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Gm12085-201ENSMUST00000119263 940 ntBASIC14.24□□□□□ -0.13
Cd28P31041 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.24□□□□□ -0.13
Cd28P31041 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.24□□□□□ -0.13
Cd28P31041 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cd28P31041 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cd28P31041 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.24□□□□□ -0.13
Cd28P31041 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cd28P31041 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd28P31041 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms