Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nedd8P29595 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.99□□□□□ -0.01
Nedd8P29595 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nedd8P29595 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.99□□□□□ -0.01
Nedd8P29595 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.99□□□□□ -0.01
Nedd8P29595 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nedd8P29595 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nedd8P29595 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.98□□□□□ -0.01
Nedd8P29595 Gm7291-201ENSMUST00000199147 382 ntBASIC14.98□□□□□ -0.01
Nedd8P29595 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Gm7514-201ENSMUST00000209475 934 ntBASIC14.98□□□□□ -0.01
Nedd8P29595 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.98□□□□□ -0.01
Nedd8P29595 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.98□□□□□ -0.01
Nedd8P29595 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nedd8P29595 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nedd8P29595 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.97□□□□□ -0.01
Nedd8P29595 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nedd8P29595 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Nedd8P29595 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Nedd8P29595 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.97□□□□□ -0.01
Nedd8P29595 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Nedd8P29595 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.97□□□□□ -0.01
Nedd8P29595 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.97□□□□□ -0.01
Nedd8P29595 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.97□□□□□ -0.01
Nedd8P29595 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nedd8P29595 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms