Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.49■□□□□ 0.55
Vcam1P29533 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vcam1P29533 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vcam1P29533 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Vcam1P29533 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.48■□□□□ 0.55
Vcam1P29533 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Vcam1P29533 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.48■□□□□ 0.55
Vcam1P29533 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.48■□□□□ 0.55
Vcam1P29533 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Gm8344-201ENSMUST00000119813 856 ntBASIC18.48■□□□□ 0.55
Vcam1P29533 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.48■□□□□ 0.55
Vcam1P29533 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Vcam1P29533 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.48■□□□□ 0.55
Vcam1P29533 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vcam1P29533 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.48■□□□□ 0.55
Vcam1P29533 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Vcam1P29533 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcam1P29533 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.47■□□□□ 0.55
Vcam1P29533 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.47■□□□□ 0.55
Vcam1P29533 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.47■□□□□ 0.55
Vcam1P29533 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vcam1P29533 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Vcam1P29533 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vcam1P29533 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Vcam1P29533 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vcam1P29533 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vcam1P29533 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vcam1P29533 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Gm6257-201ENSMUST00000163864 910 ntBASIC18.46■□□□□ 0.55
Vcam1P29533 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.46■□□□□ 0.55
Vcam1P29533 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.46■□□□□ 0.55
Vcam1P29533 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.46■□□□□ 0.55
Vcam1P29533 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.46■□□□□ 0.55
Vcam1P29533 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcam1P29533 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.45■□□□□ 0.54
Vcam1P29533 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Vcam1P29533 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Gm15358-201ENSMUST00000119249 520 ntBASIC18.45■□□□□ 0.54
Vcam1P29533 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.45■□□□□ 0.54
Vcam1P29533 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.45■□□□□ 0.54
Vcam1P29533 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Vcam1P29533 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Vcam1P29533 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Vcam1P29533 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms