Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cd40P27512 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cd40P27512 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40P27512 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.59□□□□□ -0.07
Cd40P27512 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cd40P27512 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.59□□□□□ -0.07
Cd40P27512 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Mir6404-201ENSMUST00000183699 94 ntBASIC14.59□□□□□ -0.07
Cd40P27512 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.59□□□□□ -0.07
Cd40P27512 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.59□□□□□ -0.07
Cd40P27512 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cd40P27512 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40P27512 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd40P27512 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.58□□□□□ -0.07
Cd40P27512 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cd40P27512 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.58□□□□□ -0.07
Cd40P27512 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd40P27512 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.58□□□□□ -0.08
Cd40P27512 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.58□□□□□ -0.08
Cd40P27512 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.58□□□□□ -0.08
Cd40P27512 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd40P27512 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40P27512 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40P27512 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd40P27512 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40P27512 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd40P27512 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd40P27512 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cd40P27512 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.57□□□□□ -0.08
Cd40P27512 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd40P27512 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms