Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PtcraP0C6B2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.01□□□□□ -0.17
PtcraP0C6B2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PtcraP0C6B2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14□□□□□ -0.17
PtcraP0C6B2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Rprl3-201ENSMUST00000157400 290 ntBASIC14□□□□□ -0.17
PtcraP0C6B2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Gm27704-201ENSMUST00000185094 107 ntBASIC14□□□□□ -0.17
PtcraP0C6B2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14□□□□□ -0.17
PtcraP0C6B2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PtcraP0C6B2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PtcraP0C6B2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PtcraP0C6B2 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.99□□□□□ -0.17
PtcraP0C6B2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PtcraP0C6B2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.98□□□□□ -0.17
PtcraP0C6B2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PtcraP0C6B2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms