Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PdgfrbP05622 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PdgfrbP05622 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.31■□□□□ 0.2
PdgfrbP05622 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PdgfrbP05622 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PdgfrbP05622 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.31■□□□□ 0.2
PdgfrbP05622 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PdgfrbP05622 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.3■□□□□ 0.2
PdgfrbP05622 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PdgfrbP05622 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.3■□□□□ 0.2
PdgfrbP05622 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PdgfrbP05622 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.29■□□□□ 0.2
PdgfrbP05622 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.29■□□□□ 0.2
PdgfrbP05622 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PdgfrbP05622 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PdgfrbP05622 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PdgfrbP05622 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.27■□□□□ 0.2
PdgfrbP05622 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PdgfrbP05622 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PdgfrbP05622 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PdgfrbP05622 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PdgfrbP05622 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms