Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.35■□□□□ 0.37
Vti1aO89116 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vti1aO89116 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vti1aO89116 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.34■□□□□ 0.37
Vti1aO89116 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Vti1aO89116 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.34■□□□□ 0.37
Vti1aO89116 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.34■□□□□ 0.37
Vti1aO89116 Gm6296-201ENSMUST00000222599 943 ntBASIC17.34■□□□□ 0.37
Vti1aO89116 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.34■□□□□ 0.37
Vti1aO89116 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vti1aO89116 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vti1aO89116 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Vti1aO89116 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vti1aO89116 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Vti1aO89116 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Vti1aO89116 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vti1aO89116 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Vti1aO89116 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vti1aO89116 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.33■□□□□ 0.36
Vti1aO89116 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.33■□□□□ 0.36
Vti1aO89116 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.33■□□□□ 0.36
Vti1aO89116 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Vti1aO89116 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vti1aO89116 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vti1aO89116 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vti1aO89116 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Vti1aO89116 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vti1aO89116 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.32■□□□□ 0.36
Vti1aO89116 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.32■□□□□ 0.36
Vti1aO89116 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.32■□□□□ 0.36
Vti1aO89116 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Vti1aO89116 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vti1aO89116 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vti1aO89116 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vti1aO89116 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms