Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ClppO88696 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ClppO88696 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.71■□□□□ 0.11
ClppO88696 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ClppO88696 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Gm12895-201ENSMUST00000122214 226 ntBASIC15.71■□□□□ 0.11
ClppO88696 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.71■□□□□ 0.11
ClppO88696 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.71■□□□□ 0.11
ClppO88696 Gm18421-201ENSMUST00000204122 625 ntBASIC15.71■□□□□ 0.11
ClppO88696 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ClppO88696 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClppO88696 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClppO88696 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.71■□□□□ 0.1
ClppO88696 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClppO88696 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ClppO88696 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.7■□□□□ 0.1
ClppO88696 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClppO88696 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.7■□□□□ 0.1
ClppO88696 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ClppO88696 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.7■□□□□ 0.1
ClppO88696 Gm34391-201ENSMUST00000203706 907 ntBASIC15.7■□□□□ 0.1
ClppO88696 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ClppO88696 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClppO88696 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ClppO88696 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ClppO88696 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.69■□□□□ 0.1
ClppO88696 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.69■□□□□ 0.1
ClppO88696 Rprl3-201ENSMUST00000157400 290 ntBASIC15.69■□□□□ 0.1
ClppO88696 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
ClppO88696 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.69■□□□□ 0.1
ClppO88696 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClppO88696 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.68■□□□□ 0.1
ClppO88696 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.68■□□□□ 0.1
ClppO88696 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.68■□□□□ 0.1
ClppO88696 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Gm13312-201ENSMUST00000119631 718 ntBASIC15.68■□□□□ 0.1
ClppO88696 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.68■□□□□ 0.1
ClppO88696 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.68■□□□□ 0.1
ClppO88696 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.68■□□□□ 0.1
ClppO88696 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.68■□□□□ 0.1
ClppO88696 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ClppO88696 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms