Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnnt1O88346 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnnt1O88346 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnnt1O88346 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tnnt1O88346 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.55■□□□□ 0.88
Tnnt1O88346 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.55■□□□□ 0.88
Tnnt1O88346 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.55■□□□□ 0.88
Tnnt1O88346 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.55■□□□□ 0.88
Tnnt1O88346 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.55■□□□□ 0.88
Tnnt1O88346 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnnt1O88346 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnnt1O88346 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm6443-201ENSMUST00000203599 874 ntBASIC20.54■□□□□ 0.88
Tnnt1O88346 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.54■□□□□ 0.88
Tnnt1O88346 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.54■□□□□ 0.88
Tnnt1O88346 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.54■□□□□ 0.88
Tnnt1O88346 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.54■□□□□ 0.88
Tnnt1O88346 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tnnt1O88346 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnnt1O88346 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.53■□□□□ 0.88
Tnnt1O88346 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Tnnt1O88346 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Gm13418-201ENSMUST00000119097 944 ntBASIC20.53■□□□□ 0.88
Tnnt1O88346 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.53■□□□□ 0.88
Tnnt1O88346 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnnt1O88346 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnnt1O88346 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.52■□□□□ 0.88
Tnnt1O88346 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.52■□□□□ 0.88
Tnnt1O88346 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.52■□□□□ 0.88
Tnnt1O88346 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnnt1O88346 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnnt1O88346 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnnt1O88346 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tnnt1O88346 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnnt1O88346 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnnt1O88346 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Tnnt1O88346 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnnt1O88346 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnnt1O88346 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms