Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.31■□□□□ 0.84
Vamp4O70480 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Vamp4O70480 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 Gm43347-201ENSMUST00000200226 580 ntBASIC20.31■□□□□ 0.84
Vamp4O70480 Gm9172-201ENSMUST00000212092 954 ntBASIC20.31■□□□□ 0.84
Vamp4O70480 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Vamp4O70480 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vamp4O70480 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vamp4O70480 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.3■□□□□ 0.84
Vamp4O70480 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.3■□□□□ 0.84
Vamp4O70480 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Vamp4O70480 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Vamp4O70480 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vamp4O70480 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Vamp4O70480 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.29■□□□□ 0.84
Vamp4O70480 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.29■□□□□ 0.84
Vamp4O70480 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vamp4O70480 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
Vamp4O70480 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.29■□□□□ 0.84
Vamp4O70480 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.29■□□□□ 0.84
Vamp4O70480 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vamp4O70480 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Gm4459-201ENSMUST00000118750 468 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44357-201ENSMUST00000195897 142 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm19658-201ENSMUST00000196231 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44367-201ENSMUST00000196836 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44350-201ENSMUST00000197197 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44390-201ENSMUST00000197533 144 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44313-201ENSMUST00000198018 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44486-201ENSMUST00000198508 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44314-201ENSMUST00000199263 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44394-201ENSMUST00000199558 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44484-201ENSMUST00000199873 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44466-201ENSMUST00000200264 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm44359-201ENSMUST00000200671 138 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.28■□□□□ 0.84
Vamp4O70480 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Vamp4O70480 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vamp4O70480 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vamp4O70480 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.27■□□□□ 0.84
Vamp4O70480 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Vamp4O70480 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms