Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Mmp8O70138 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.67■□□□□ 0.74
Mmp8O70138 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Mmp8O70138 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Mmp8O70138 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Mmp8O70138 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.67■□□□□ 0.74
Mmp8O70138 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp8O70138 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.66■□□□□ 0.74
Mmp8O70138 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Mmp8O70138 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp8O70138 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Mmp8O70138 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.65■□□□□ 0.74
Mmp8O70138 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.65■□□□□ 0.74
Mmp8O70138 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Mmp8O70138 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp8O70138 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.64■□□□□ 0.74
Mmp8O70138 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
Mmp8O70138 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp8O70138 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp8O70138 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp8O70138 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.64■□□□□ 0.74
Mmp8O70138 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp8O70138 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Mmp8O70138 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.64■□□□□ 0.73
Mmp8O70138 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp8O70138 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Mmp8O70138 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Mmp8O70138 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp8O70138 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.63■□□□□ 0.73
Mmp8O70138 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.63■□□□□ 0.73
Mmp8O70138 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp8O70138 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mmp8O70138 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp8O70138 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.62■□□□□ 0.73
Mmp8O70138 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.62■□□□□ 0.73
Mmp8O70138 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mmp8O70138 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp8O70138 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp8O70138 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Mmp8O70138 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp8O70138 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp8O70138 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mmp8O70138 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp8O70138 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp8O70138 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms