Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Gm27463-201ENSMUST00000183569 57 ntBASIC17.24■□□□□ 0.35
ChkbO55229 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.24■□□□□ 0.35
ChkbO55229 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.24■□□□□ 0.35
ChkbO55229 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.24■□□□□ 0.35
ChkbO55229 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ChkbO55229 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.23■□□□□ 0.35
ChkbO55229 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ChkbO55229 Gm37025-201ENSMUST00000195159 829 ntBASIC17.23■□□□□ 0.35
ChkbO55229 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.23■□□□□ 0.35
ChkbO55229 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.23■□□□□ 0.35
ChkbO55229 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ChkbO55229 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkbO55229 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Sybu-209ENSMUST00000228639 4113 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Gm6433-201ENSMUST00000118634 875 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Gm11539-201ENSMUST00000119837 557 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Gm13436-201ENSMUST00000120418 567 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.22■□□□□ 0.35
ChkbO55229 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ChkbO55229 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ChkbO55229 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ChkbO55229 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.21■□□□□ 0.35
ChkbO55229 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
ChkbO55229 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ChkbO55229 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ChkbO55229 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ChkbO55229 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
ChkbO55229 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ChkbO55229 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ChkbO55229 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ChkbO55229 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms