Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ChkaO54804 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.31■□□□□ 0.2
ChkaO54804 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.31■□□□□ 0.2
ChkaO54804 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.31■□□□□ 0.2
ChkaO54804 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ChkaO54804 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ChkaO54804 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.3■□□□□ 0.2
ChkaO54804 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.3■□□□□ 0.2
ChkaO54804 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ChkaO54804 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.3■□□□□ 0.2
ChkaO54804 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ChkaO54804 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ChkaO54804 App-207ENSMUST00000227737 2827 ntBASIC16.3■□□□□ 0.2
ChkaO54804 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.3■□□□□ 0.2
ChkaO54804 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ChkaO54804 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ChkaO54804 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
ChkaO54804 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ChkaO54804 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ChkaO54804 Gm6433-201ENSMUST00000118634 875 ntBASIC16.29■□□□□ 0.2
ChkaO54804 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Gm37722-201ENSMUST00000193757 208 ntBASIC16.29■□□□□ 0.2
ChkaO54804 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.29■□□□□ 0.2
ChkaO54804 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.29■□□□□ 0.2
ChkaO54804 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.29■□□□□ 0.2
ChkaO54804 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ChkaO54804 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.28■□□□□ 0.2
ChkaO54804 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ChkaO54804 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.28■□□□□ 0.2
ChkaO54804 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ChkaO54804 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.28■□□□□ 0.2
ChkaO54804 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.28■□□□□ 0.2
ChkaO54804 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ChkaO54804 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ChkaO54804 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.27■□□□□ 0.2
ChkaO54804 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.27■□□□□ 0.2
ChkaO54804 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.27■□□□□ 0.2
ChkaO54804 Gm21559-201ENSMUST00000220638 855 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms