Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.46■□□□□ 0.39
Per1O35973 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Per1O35973 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Per1O35973 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Per1O35973 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Per1O35973 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Per1O35973 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.45■□□□□ 0.38
Per1O35973 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Gm13418-201ENSMUST00000119097 944 ntBASIC17.45■□□□□ 0.38
Per1O35973 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Per1O35973 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.45■□□□□ 0.38
Per1O35973 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Per1O35973 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Per1O35973 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Per1O35973 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Per1O35973 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Gm25990-201ENSMUST00000102440 86 ntBASIC17.44■□□□□ 0.38
Per1O35973 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.44■□□□□ 0.38
Per1O35973 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Per1O35973 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.44■□□□□ 0.38
Per1O35973 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.44■□□□□ 0.38
Per1O35973 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.44■□□□□ 0.38
Per1O35973 Mzt1-203ENSMUST00000227948 952 ntBASIC17.44■□□□□ 0.38
Per1O35973 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.44■□□□□ 0.38
Per1O35973 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Per1O35973 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.43■□□□□ 0.38
Per1O35973 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.43■□□□□ 0.38
Per1O35973 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Per1O35973 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.43■□□□□ 0.38
Per1O35973 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.43■□□□□ 0.38
Per1O35973 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.43■□□□□ 0.38
Per1O35973 Gm18195-201ENSMUST00000207604 706 ntBASIC17.43■□□□□ 0.38
Per1O35973 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.43■□□□□ 0.38
Per1O35973 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Per1O35973 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Per1O35973 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per1O35973 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.42■□□□□ 0.38
Per1O35973 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Per1O35973 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.42■□□□□ 0.38
Per1O35973 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Per1O35973 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per1O35973 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms