Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm11249-201ENSMUST00000117071 859 ntBASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm12896-201ENSMUST00000118430 226 ntBASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm10602-201ENSMUST00000098239 609 ntBASIC12.62□□□□□ -0.39
Tnfsf11O35235 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.62□□□□□ -0.39
Tnfsf11O35235 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf11O35235 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.61□□□□□ -0.39
Tnfsf11O35235 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf11O35235 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Gm37292-201ENSMUST00000192062 758 ntBASIC12.6□□□□□ -0.39
Tnfsf11O35235 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.6□□□□□ -0.39
Tnfsf11O35235 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf11O35235 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms