Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.72■□□□□ 0.27
Ebf3O08791 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.72■□□□□ 0.27
Ebf3O08791 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.72■□□□□ 0.27
Ebf3O08791 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ebf3O08791 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.71■□□□□ 0.27
Ebf3O08791 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ebf3O08791 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.71■□□□□ 0.27
Ebf3O08791 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ebf3O08791 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf3O08791 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ebf3O08791 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ebf3O08791 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ebf3O08791 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.7■□□□□ 0.26
Ebf3O08791 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.7■□□□□ 0.26
Ebf3O08791 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ebf3O08791 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
Ebf3O08791 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf3O08791 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.69■□□□□ 0.26
Ebf3O08791 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.69■□□□□ 0.26
Ebf3O08791 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.69■□□□□ 0.26
Ebf3O08791 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ebf3O08791 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf3O08791 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ebf3O08791 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Ebf3O08791 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.68■□□□□ 0.26
Ebf3O08791 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf3O08791 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ebf3O08791 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Ebf3O08791 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.68■□□□□ 0.26
Ebf3O08791 Gm10060-201ENSMUST00000212002 111 ntBASIC16.68■□□□□ 0.26
Ebf3O08791 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms